All batteries arte different. It is always best to run a system where all batteries are the same brand, model, and manufacture date with the same history. Even then they will be different. They will each have a different "strength". One battery will tend to discharge the other batteries in order to stay at maximum charge. They will all charge at different rates and develop differing amounts of heat and vaporize off water at different rates. 2-6V batteries in series will see less of this (or in principle "can not do this") as compared to 2-12V batteries in parallel.
So the real practical question is how much do they differ? If these are all small routine amounts of water and the batteries each separately are in good condition, then everything should be just fine. If when connected together off a charger one stays good and one discharges a large amount, it may be time.